PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_012572428.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Cicereae; Cicer
Family bHLH
Protein Properties Length: 240aa    MW: 26753.4 Da    PI: 9.7091
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_012572428.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.23.5e-144591354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    + h + E++RR+++N ++  Lr+l+P++     +K + a++L  A+eYI++L
  XP_012572428.1 45 TEHFATEKQRREQLNGKYKILRSLIPNP-----TKIDRASVLGDAIEYIREL 91
                    68**************************.....9****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.51E-1540106IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.3074291IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.4E-114591IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.6E-1345100IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.47E-104791No hitNo description
SMARTSM003539.6E-124897IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 240 aa     Download sequence    Send to blast
MSSRNGSLFG GGDEMEGDGS QLDMGVLEFN RVTASVGKGR GGKATEHFAT EKQRREQLNG  60
KYKILRSLIP NPTKIDRASV LGDAIEYIRE LVRTKNELTL LVERKRHGRE MSKRLKTEDD  120
AAESCNIKPF GDADGSIRTS WLQRKSKDSA VXVRIIDNDV TIKLIQRKKV NCLLFVSKVL  180
DELQLELYHV AGGFVGEYFS FLLKSKVIEG SSVYPSAIAN RVIDVLDTQY AAVVPILSRL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0090667e-65AP009066.1 Lotus japonicus genomic DNA, chromosome 4, clone: LjT07D18, TM0256, complete sequence.
GenBankBT1363917e-65BT136391.1 Lotus japonicus clone JCVI-FLLj-19K6 unknown mRNA.
GenBankFJ3797607e-65FJ379760.1 Lotus japonicus putative basic helix-loop-helix protein BHLH14 gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012572428.11e-175PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH91-like
SwissprotQ8GX462e-67BH091_ARATH; Transcription factor bHLH91
TrEMBLI1K3871e-142I1K387_SOYBN; Uncharacterized protein
STRINGGLYMA05G26490.11e-141(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF37433262
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31210.11e-68bHLH family protein